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Revision: Biotechnology and Its Applications >> Principles and Processes of Biotechnology Biology (Theory) ISC (Science) ISC Class 12 CISCE

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Definitions [10]

Definition: Biotechnology

The European Federation of Biotechnology (EFB) defined biotechnology as ‘the integration of natural science and organisms, cells, parts thereof, and molecular analogues for products and services.’

Define genetic engineering.

Genetic engineering is the manipulation and transfer of genes from one organism to another organism to create a new DNA called recombinant DNA (rDNA). Genetic engineering is also called recombinant DNA technology.

Definition: Palindrome

A palindrome in DNA is a sequence of base pairs that reads the same on both strands when read in the same direction (5′ → 3′).

 
Definition: Plasmids

Plasmids are small, circular, double-stranded DNA molecules found in bacteria that replicate independently of chromosomal DNA and often carry antibiotic-resistance genes.

Definition: Phages (Bacteriophages)

Phages are viruses that infect bacteria and contain linear DNA into which foreign DNA fragments can be inserted for cloning purposes.

Definition: Gene Library

A gene library is a collection of cloned DNA fragments that together represent the complete genome of an organism.

Definition: Gene Cloning

Gene cloning is a genetic engineering technique in which a single copy of a gene or DNA segment is isolated and multiplied to produce many identical copies.

Definition: Cloning

The process of producing an exact genetic replica of a cell, tissue, organ, or entire organism is called cloning.

or

Cloning is the process of producing identical copies of a gene, DNA fragment, cell, or organism.

Definition: Reproductive Cloning

The production of a complete organism by fusion of a somatic cell nucleus with an enucleated ovum is called reproductive cloning.

Definition: Therapeutic Cloning

The technique of producing stem cells from cloned embryos for treatment of diseases is called therapeutic cloning.

Key Points

Key Points: Genetic Engineering
  • Genetic engineering is the manipulation of DNA to modify genes, transfer them between organisms, or alter gene expression.
  • Because the genetic code is universal, genes from one organism can function in another to produce useful products like human insulin and growth hormone.
  • This technology is used to create transgenic organisms and genetically modified crops with improved traits such as disease resistance and better nutrition.
 
Key Points: Recombinant DNA technology
  • Recombinant DNA technology involves combining DNA from two different organisms to form chimeric DNA using genetic engineering techniques.
  • Foreign DNA is cut and joined with vector DNA (usually plasmids) using restriction enzymes, known as molecular scissors.
  • The first recombinant DNA was created in 1972 by Stanley Cohen and Herbert Boyer using an antibiotic resistance gene.
  • The process includes identifying a desired gene, introducing it into a host cell, and ensuring its stable inheritance.
 
Key Points: Tools of Recombinant DNA Technology
  • Recombinant DNA technology depends on the isolation, cutting, and joining of DNA fragments to form chimeric DNA.
  • Restriction enzymes act as molecular scissors that cut DNA at specific sequences to obtain desired genes.
  • DNA ligase joins DNA fragments by forming covalent bonds, producing recombinant DNA molecules.
  • Cloning vectors are DNA molecules that carry foreign DNA into host cells for replication.
  • Common vectors include plasmids, bacteriophages, cosmids, and phasmids, which replicate independently inside host cells.
Key Points: Features of an Ideal Vector
  • Origin of replication (ori): Enables the vector and inserted DNA to replicate inside the host cell and controls copy number.
  • Selectable marker: Marker genes (e.g., antibiotic resistance) help identify and select transformed and recombinant cells.
  • Cloning sites: Presence of unique restriction enzyme sites allows insertion of foreign DNA without fragmenting the vector.
  • Small size: Small vectors are easy to isolate, handle, and manipulate during cloning.
Key Points: pBR 322 Vectors
Feature Description
Name pBR322
Developers Bolivar and Rodriguez
Source Derived from E. coli plasmid ColE1
Size 4,362 base pairs
Importance Commonly used “workhorse” cloning vector
Origin of replication (ori) Enables independent replication in host cell
Selectable markers ampR (ampicillin resistance) and tetR (tetracycline resistance)
Restriction sites Bam HI, Hind III, Sal I, Pvu II, Pst I, Eco RI, Cla I
Special feature Bam HI site lies in tetR gene; insertion here inactivates tetracycline resistance
ROP gene Codes proteins involved in plasmid replication
Selection method Recombinants grow on ampicillin but not on tetracycline; non-recombinants grow on both
Key Points: pUC Vectors
Feature Description
Name pUC series plasmid vectors
Size About 2,700 base pairs
Selectable marker Ampicillin resistance gene (ampR)
Origin of replication Derived from pBR322
Reporter gene lac Z gene from E. coli
Cloning principle Insertional inactivation of lac Z gene
Vector pairs pUC8 & pUC9, pUC18 & pUC19, pUC118 & pUC119
Special feature Paired vectors have reversed orientation of restriction sites
Advantage Allows isolation and study of both DNA strands
Uses Gene cloning, sequencing, mutagenesis
Key Points: Artificial Chromosomes as Vectors
Feature Bacterial Artificial Chromosomes (BACs) Yeast Artificial Chromosomes (YACs)
Source Derived from bacterial F-plasmid Derived from yeast (Saccharomyces cerevisiae) DNA
DNA insert size 100–300 kb (up to 350 kb) Up to 1 million base pairs
Stability More stable Less stable than BACs
Host cell E. coli Yeast cells
Important elements oriS, repE, parA, parB, antibiotic resistance, T7 & SP6 promoters Telomere, centromere, ori, selectable markers
Main use Genome mapping and sequencing Cloning very large eukaryotic genes
Special feature Maintains low copy number Behaves like a true yeast chromosome
Application Used in Human Genome Project (HGP) Used in Human Genome Project (HGP)
Key Points: Processes of Recombinant DNA Technology
  1. Isolation of DNA:
    Genetic material (DNA) is extracted and purified from the source organism by removing proteins, RNA, lipids, and other impurities.
  2. Cutting and Separation of DNA:
    DNA is cut at specific sites using restriction endonucleases, and desired fragments are separated by gel electrophoresis and isolated by elution.
  3. Amplification of Gene (PCR):
    The gene of interest is amplified using Polymerase Chain Reaction (PCR) to produce millions of copies for effective cloning.
  4. Ligation and Gene Transfer:
    The desired DNA fragment is ligated into a vector and introduced into a host cell by methods such as transformation, electroporation, or gene gun.
  5. Expression and Production:
    The host cells expressing the recombinant gene are cultured on a large scale in bioreactors to produce the desired recombinant protein.
  6. Downstream Processing:
    The final product is separated, purified, and processed to obtain a market-ready product.
Key Points: Applications of Genetic Engineering
  1. Understanding gene structure and expression:
    Genetic engineering helps in studying gene structure, regulation, exons, introns, and mechanisms of gene expression.
  2. Medical applications:
    Used to produce therapeutic proteins such as insulin, growth hormone, and enzymes, and to diagnose and predict genetic diseases.
  3. Industrial applications:
    Enables large-scale production of hormones, medicines, enzymes, and industrial chemicals through recombinant microorganisms.
  4. Agricultural applications:
    Development of genetically modified crops with higher yield, better nutrition, pest resistance, and reduced dependence on fertilizers.
  5. Gene therapy:
    Used to treat genetic disorders by replacing defective genes, such as in SCID and experimental treatments in animals and humans.
  6. Research and future potential:
    Genetic engineering has vast potential but also raises concerns about environmental, health, and ethical risks, requiring careful regulation.
Key Points: Genetic Transformation in Plants
  • Genetic transformation is the process of introducing foreign DNA into plant cells and integrating it into the plant genome.
  • The process involves four steps: DNA introduction, integration and stabilization, regeneration of whole plants, and inheritance in future generations.
  • Gene transfer enables movement of genes across sexual barriers, helping develop plants with desirable traits.
  • Vector-dependent gene transfer uses vectors to deliver foreign genes efficiently into plant cells.
  • Agrobacterium tumefaciens and its Ti plasmid are widely used natural vectors for gene transfer in dicot plants.
  • Virus-mediated gene transfer (e.g., Cauliflower mosaic virus) is used to introduce genes into plants at high copy numbers.
  • Reporter and selectable marker genes help identify and select transformed plant cells during the transformation process.
 
Key Points: Genetic Transformation in Animals
  • Genetic transformation in animals is achieved by introducing foreign DNA into fertilized eggs or embryos.
  • Microinjection method involves direct injection of foreign DNA into the pronucleus of a fertilized egg and is widely used to produce transgenic animals.
  • Nuclear replacement transfers a somatic cell nucleus into an enucleated egg to produce genetically identical offspring.
  • Cloning allows multiplication of desirable transformed genomes to produce transgenic animals.

Important Questions [20]

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