A palindrome in DNA is a sequence of base pairs that reads the same on both strands when read in the same direction (5′ → 3′).
Definitions [3]
Define.
Biotechnology
The technique of bringing about improvements in living organisms by genetic modifications and hybridization, for the welfare of human beings is known as ‘Biotechnology’.
Definition: Biotechnology
The European Federation of Biotechnology (EFB) defined biotechnology as ‘the integration of natural science and organisms, cells, parts thereof, and molecular analogues for products and services.’
Definition: Palindrome
Key Points
Key Points: Biotechnology
- Biotechnology, a term coined by Karl Ereky in 1919, is the use of biological systems and genetic modifications to develop products and services for human welfare.
- Traditional biotechnology relies on small-scale, natural processes like fermentation (e.g., producing curd and wine), whereas modern biotechnology operates on a large scale.
- Modern biotechnology is fundamentally driven by two core techniques: genetic engineering (the targeted alteration of DNA and RNA) and bioprocess engineering.
- The field experienced a major breakthrough with the development of recombinant DNA technology by Cohen and Boyer in 1973.
- By integrating disciplines such as molecular biology and biochemistry, biotechnology enables crucial applications in both medicine (antibiotics, vaccines, insulin) and agriculture (high-yield, disease-resistant crops).
Key Points: Principles of Processes of Biotechnology
- Two Core Techniques - Modern biotechnology is based on (i) Genetic Engineering and (ii) Chemical Engineering.
- Genetic Engineering - Deals with the alteration of DNA and RNA to achieve desired results in a directed, predetermined way using in vitro processes.
- Chemical Engineering - Maintains a sterile environment for manufacturing useful products like vaccines, antibodies, enzymes, vitamins, and therapeutics.
- What Genetic Engineering Involves - Repairing/replacing defective genes, synthesising new genes, transferring genes, combining genes from two organisms, and altering the genotype.
- Other Names for Genetic Engineering - Also called Recombinant DNA (rDNA) Technology or Gene Cloning, as it involves transferring a gene via a suitable vector to a new location or organism.
Key Points: Formation of First Recombinant DNA
- The first recombinant DNA was created by Stanley Cohen and Herbert Boyer (1972) by linking the antibiotic resistance gene with a plasmid of Salmonella typhimurium.
- Restriction enzymes (molecular scissors) cut DNA at specific locations; ligase joins the cut ends to link the gene with the plasmid.
- Plasmids act as vectors to transfer the attached DNA into the host organism.
- Recombinant DNA transferred into E. coli replicated using the host's DNA polymerase — making multiple copies, called cloning.
- Steps in genetic modification - identify desirable genes → introduce into host → maintain and transfer DNA to progeny.
Key Points: Tools of Recombinant DNA Technology
- Recombinant DNA technology manipulates and joins DNA from different sources using three main tools: enzymes, cloning vectors, and competent hosts.
- Restriction enzymes act as "molecular scissors" to cut DNA at specific sites, while DNA ligase acts as "glue" to seal the fragments together.
- Cloning vectors (such as plasmids or bacteriophages) serve as vehicles for carrying, inserting, and replicating foreign DNA within a host cell.
- Competent hosts are cells that have been specially treated (using techniques such as heat shock or gene guns) so they can successfully take up the foreign recombinant DNA.
Key Points: Restriction Enzymes
- Restriction enzymes, often called "molecular scissors", are specialised endonucleases that cut DNA at specific internal positions to facilitate genetic engineering.
- Over 900 restriction enzymes, including the first discovered Hind II, have been successfully isolated from more than 230 strains of bacteria.
- These enzymes are named using a standard convention based on the genus, species, strain, and discovery order of the source bacterium, such as EcoRI.
- They function by inspecting DNA to find specific palindromic nucleotide sequences, which are base pair sequences that read the same on both strands in the same orientation.
- Type II restriction enzymes are the primary ones used in genetic manipulation because they reliably recognise and cut at very specific target sequences.
- Cutting the DNA slightly away from the centre of a palindrome creates "sticky ends", which are single-stranded overhangs that easily bond with complementary DNA using the enzyme DNA ligase.
- The resulting DNA fragments are separated by size using gel electrophoresis, where smaller negatively charged fragments move faster through an agarose matrix toward an anode.
- The separated DNA is visualised as bright orange bands under UV light after ethidium bromide staining and is carefully extracted from the gel through a process called elution.
Key Points: Cloning Vectors
- Vectors (like plasmids and bacteriophages) are DNA molecules used to carry and replicate foreign DNA inside a host cell.
- An ideal vector must have an origin of replication (ori), selectable markers, and specific cloning sites.
- pBR322 is a widely used standard bacterial plasmid vector containing these essential features.
- Recombinant DNA is identified using insertional inactivation (e.g., in blue-white selection, recombinant colonies appear white due to a disrupted gene).
- Higher organisms require specific vectors: Ti plasmids for plants and modified retroviruses for animals.
Key Points: Competent Host (For Transformation with Recombinant DNA)
- DNA is hydrophilic, so it cannot enter cells easily; bacteria are made competent using Ca²⁺ ions.
- Cells are treated with cold (ice) and heat shock (42°C) to help the uptake of recombinant DNA.
- Transformation is the process of introducing recombinant DNA into bacterial cells.
- Microinjection → DNA is directly injected into the nucleus of animal cells.
- Biolistics (gene gun) and disarmed pathogens are used to transfer DNA into plant and host cells.
Key Points: Processes of Recombinant DNA Technology
- Cells are first broken open using specific enzymes (such as lysozyme for bacteria) to successfully isolate the genetic material.
- The purified DNA is precisely cut at specific locations using restriction enzymes, which act as "molecular scissors" to extract the desired gene.
- The resulting DNA fragments are separated by size using gel electrophoresis, and the specific target sequence is extracted.
- The desired gene is then amplified into millions of copies using the Polymerase Chain Reaction (PCR) technique.
- The amplified gene is joined to a carrier vector using the enzyme DNA ligase to construct a new molecule called recombinant DNA.
- This recombinant DNA is introduced into a chemically treated, competent host cell (such as a bacterium) through a process known as transformation.
- For commercial use, these transformed host cells are cultured on a massive scale inside large, environmentally controlled vessels called bioreactors.
- The final therapeutic product undergoes downstream processing, which involves rigorous separation, purification, and quality testing before packaging.
